Home Research Feeds The early infant gut microbiome varies in association with a maternal high-fat diet

The early infant gut microbiome varies in association with a maternal high-fat dietOriginal paper

Researched by:

  • Karen Pendergrass

Last Updated: 2026-07-05

Karen Pendergrass
Karen Pendergrass

Karen Pendergrass is a microbiome researcher specializing in microbiome-targeted interventions (MBTIs). She systematically analyzes scientific literature to identify microbial patterns, develop hypotheses, and validate interventions. As the founder of the Microbiome Signatures Database, she bridges microbiome research with clinical practice. In 2012, based on her own investigative research, she became the first documented case of FMT for Celiac Disease, four years before the first published case study.

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Location
United States of America
Sample Site
Meconium
Species
Homo sapiens

What was studied?

This prospective study asked whether a maternal high-fat diet in pregnancy shapes the early infant gut microbiome, recapitulating an earlier finding in nonhuman primates. Researchers assessed maternal diet with a validated NHANES dietary screener questionnaire. Infant meconium at birth and stool at 4 to 6 weeks were profiled by 16S rRNA gene sequencing. Dietary extremes were compared, and taxa were identified using principal coordinate analysis and LEfSe feature selection.

Who was studied?

Participants were mother-infant pairs from a Houston, USA population-based cohort, largely Hispanic (85.4%) women delivering singleton term pregnancies. 157 dyads were sampled at delivery, with 75 followed longitudinally to 4 to 6 weeks. Maternal fat intake averaged 33.1% (standard deviation 6.1%). For analysis, extremes were compared: a high-fat group (n equals 13, mean 43.1%) versus a control group (n equals 13, mean 24.4%). Groups did not differ significantly in pre-pregnancy BMI or delivery mode.

What were the most important findings?

Neonatal meconium clustered distinctly by maternal gestational diet (PERMANOVA p equals 0.001; p equals 0.04 by unweighted UniFrac). This separation was not explained by fibre, added sugar, BMI, antibiotics, delivery mode, or gestational diabetes. LEfSe identified seven discriminating taxa. High-fat exposure was linked most notably to relative depletion of Bacteroides, a symbiont that aids mucosal immune maturation. The Bacteroides depletion persisted at 6 weeks, inversely correlating with maternal fat intake (p equals 0.02).

What are the greatest implications of this study?

The findings suggest maternal dietary fat, independent of obesity, leaves a lasting imprint on the newborn gut microbiome that persists into early infancy. Lower Bacteroides could affect energy extraction from milk oligosaccharides and early immune development. The results reinforce counselling on macronutrient intake during pregnancy and lactation, not just calories. The authors note the rapid dietary screener cannot capture total calories, and the nested case-control design was small. Mechanisms of maternal-to-infant transmission remain to be confirmed.

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